1RTV

RmlC (dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) crystal structure from Pseudomonas aeruginosa, apo structure

Structural Biology Knowledgebase: 1RTV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 1RTV

Classification: ISOMERASE

Total Structure Weight: 21233.06

Macromolecule Entities
Molecule Chains Length Organism Details
dTDP-4-dehydrorhamnose 3,5-epimerase A 184 Pseudomonas aeruginosa EC#: 5.1.3.13 IUBMB
Gene Name(s): rmlC PA5164
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SRT
Query on SRT

A S,R MESO-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-XIXRPRMCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.230
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 57.83 α = 90.00
b = 57.83 β = 90.00
c = 161.62 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-12-10
  • Released Date: 2004-03-02
  • Deposition author(s): Dong, C.J., Naismith, J.H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4