Structural Similarities for the Entities in PDB 5O6U

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: crRNA rna | Length: 43

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #2 | Chains B

Description: CRISPR-associated protein, Csy4 family protein | Length: 182

No structure alignment results are available for 5O6U.B explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

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View how chain 5O6U.B compares with the representative chain xxxx. Select a comparison method:


Entity #3 | Chains C,D,E

Description: Uncharacterized protein protein | Length: 315

No structure alignment results are available for 5O6U.C, 5O6U.D, 5O6U.E explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

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View how chain 5O6U.E compares with the representative chain xxxx. Select a comparison method:


Entity #4 | Chains F

Description: Uncharacterized protein protein | Length: 336

No structure alignment results are available for 5O6U.F explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

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View how chain 5O6U.F compares with the representative chain xxxx. Select a comparison method:


Entity #5 | Chains H

Description: non-target DNA dna | Length: 21

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #6 | Chains I

Description: target DNA dna | Length: 27

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


References