Structural Similarities for the Entities in PDB 4TPI

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: May-03-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains Z

Description: TRYPSINOGEN protein | Length: 229

No structure alignment results are available for 4TPI.Z explicitly.

It is represented by chain 4I8H.A which is 100% sequence identical.

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View how chain 4TPI.Z compares with the representative chain PDP:4I8HAa. Select a comparison method:


Entity #2 | Chains I

Description: BOVINE PANCREATIC TRYPSIN INHIBITOR protein | Length: 58

No structure alignment results are available for 4TPI.I explicitly.

It is represented by chain 1G6X.a which has more than 90% sequence identity.

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View how chain 4TPI.I compares with the representative chain d1g6xa_. Select a comparison method:


References