Structural Similarities for the Entities in PDB 4OLB

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing ALL results. Show only significant results.

Cluster data are up-to-date as of: Mar-28-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: Protein argonaute-2 protein | Length: 859

No structure alignment results are available for 4OLB.A explicitly.

It is represented by chain 4Z4D.A which is 100% sequence identical.

Show structure comparison results


View how chain 4OLB.A compares with the representative chain PDP:4Z4DAa. Select a comparison method:

Entity #2 | Chains B

Description: 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3' rna | Length: 10

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.