The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].
To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment  is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser .
Currently viewing only significant results (P-value < 0.001). Show all available results.
Cluster data are up-to-date as of: Feb-09-2016
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A detailed description of the procedure for the all vs. all alignments is available.
Description: TBC1 domain family member 20 protein |
These chains are
represented by chain 4HL4.A
which is 100% sequence identical.
View how chain 4HLQ.I compares with the representative chain PDP:4HL4Aa. Select a comparison method:
Description: Ras-related protein Rab-1B protein |
These chains are
represented by chain 2CE2.X
which has more than 40% sequence identity.
View how chain 4HLQ.J compares with the representative chain PDP:2CE2Xa. Select a comparison method:
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The RCSB PDB is funded by a grant (DBI-1338415) from the
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