Structural Similarities for the Entities in PDB 4HFO

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Feb-09-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,I,J,K,L

Description: Biogenic amine-binding protein protein | Length: 195

No structure alignment results are available for 4HFO.A, 4HFO.B, 4HFO.C, 4HFO.D, 4HFO.I, 4HFO.J, 4HFO.K, 4HFO.L explicitly.

These chains are represented by chain 4GE1.A which has more than 95% sequence identity.

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View how chain 4HFO.L compares with the representative chain PDP:4GE1Aa. Select a comparison method:


References