Structural Similarities for the Entities in PDB 4HCR

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-21-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains H,M

Description: PF-547659 heavy chain protein | Length: 229

No structure alignment results are available for 4HCR.H, 4HCR.M explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 4HCR.M compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains L,N

Description: PF-547659 light chain protein | Length: 219

No structure alignment results are available for 4HCR.L, 4HCR.N explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 4HCR.N compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #3 | Chains A,B

Description: Mucosal addressin cell adhesion molecule 1 protein | Length: 209

No structure alignment results are available for 4HCR.A, 4HCR.B explicitly.

These chains are represented by chain 4HBQ.A which has more than 95% sequence identity.

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View how chain 4HCR.B compares with the representative chain PDP:4HBQAa. Select a comparison method:


References