4H4O

Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with (E)-3-(3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)- 4-fluorophenoxy)-5-fluorophenyl)acrylonitrile (JLJ506), A Non-nucleoside inhibitor


Structural Similarities for the Entities in PDB 4H4O

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Aug-23-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT protein | Length: 557

No structure alignment results are available for 4H4O.A explicitly.

It is represented by chain 4G1Q.A which is 100% sequence identical.

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View how chain 4H4O.A compares with the representative chain PDP:4G1QAa. Select a comparison method:


Entity #2 | Chains B

Description: Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT protein | Length: 428

No structure alignment results are available for 4H4O.B explicitly.

It is represented by chain 4G1Q.B which is 100% sequence identical.

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View how chain 4H4O.B compares with the representative chain PDP:4G1QBa. Select a comparison method:


References