Structural Similarities for the Entities in PDB 4GUR

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jul-19-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: Lysine-specific histone demethylase 1B protein | Length: 776

No structure alignment results are available for 4GUR.A explicitly.

It is represented by chain 4GUT.A which is 100% sequence identical.

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View how chain 4GUR.A compares with the representative chain PDP:4GUTAa. Select a comparison method:


Entity #2 | Chains B

Description: Putative oxidoreductase GLYR1 protein | Length: 124

No structure alignment results are available for 4GUR.B explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

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Entity #3 | Chains C

Description: Histone H3.3 protein | Length: 21

No structure alignment results are available for 4GUR.C explicitly.

It is represented by chain XXXX.null which has more than 95% sequence identity.

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View how chain 4GUR.C compares with the representative chain xxxx. Select a comparison method:


References