Structural Similarities for the Entities in PDB 4FGX

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A

Description: Beta-secretase 1 protein | Length: 433

No structure alignment results are available for 4FGX.A explicitly.

It is represented by chain 4L7G.A which has more than 95% sequence identity.

Show structure comparison results


View how chain 4FGX.A compares with the representative chain PDP:4L7GAa. Select a comparison method:

Entity #2 | Chains B

Description: Inhibitor (2R,5S,8S,12S,13S,16S,19S,22S)-16-(3-amino-3-oxopropyl)-2,13-dibenzyl-12,22-dihydroxy-8-isobutyl-19-isopropyl-3,5,17-trimethyl-4,7,10,15,18,21-hexaoxo-3,6,9,14,17,20-hexaazatricosan-1-oic acid protein | Length: 7

This entity is too short to be considered for the all vs. all structure alignments.