Structural Similarities for the Entities in PDB 4FB1

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Feb-02-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: Methylamine utilization protein MauG protein | Length: 373

No structure alignment results are available for 4FB1.A, 4FB1.B explicitly.

These chains are represented by chain 3SJL.A which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 4FB1.B compares with the representative chain PDP:3SJLAa. Select a comparison method:


Entity #2 | Chains C,E

Description: Methylamine dehydrogenase light chain protein | Length: 137

No structure alignment results are available for 4FB1.C, 4FB1.E explicitly.

These chains are represented by chain 2OIZ.D which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 4FB1.E compares with the representative chain PDP:2OIZDa. Select a comparison method:


Entity #3 | Chains D,F

Description: Methylamine dehydrogenase heavy chain protein | Length: 385

No structure alignment results are available for 4FB1.D, 4FB1.F explicitly.

These chains are represented by chain 3SJL.D which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4FB1.F compares with the representative chain PDP:3SJLDa. Select a comparison method:


References