Structural Similarities for the Entities in PDB 4DX8

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,D,E

Description: Integrin beta-1-binding protein 1 protein | Length: 154

No structure alignment results are available for 4DX8.A, 4DX8.B, 4DX8.D, 4DX8.E explicitly.

These chains are represented by chain 4JIF.A which is 100% sequence identical.

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View how chain 4DX8.E compares with the representative chain PDP:4JIFAa. Select a comparison method:

Entity #2 | Chains H,I,J,K

Description: Krev interaction trapped protein 1 protein | Length: 203