Structural Similarities for the Entities in PDB 4CEJ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A protein | Length: 1232

No structure alignment results are available for 4CEJ.A explicitly.

It is represented by chain 4CEI.A which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CEJ.A compares with the representative chain PDP:4CEIAa. Select a comparison method:


Entity #2 | Chains B

Description: ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B protein | Length: 1166

No structure alignment results are available for 4CEJ.B explicitly.

It is represented by chain 4CEI.B which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CEJ.B compares with the representative chain PDP:4CEIBa. Select a comparison method:


Entity #3 | Chains X

Description: DNA dna | Length: 70

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


References