Structural Similarities for the Entities in PDB 4BHH

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-17-2015

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains B,D,F,Z

Description: NUCLEOPROTEIN protein | Length: 236

No structure alignment results are available for 4BHH.B, 4BHH.D, 4BHH.F, 4BHH.Z explicitly.

These chains are represented by chain 4BGP.A which is 100% sequence identical.

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View how chain 4BHH.Z compares with the representative chain PDP:4BGPAa. Select a comparison method:

Entity #2 | Chains R

Description: POLY-URIDINE 45-MER rna | Length: 45

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.