Structural Similarities for the Entities in PDB 4BBL

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-17-2015

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X

Description: NUCLEOPROTEIN protein | Length: 499

No structure alignment results are available for 4BBL.A, 4BBL.B, 4BBL.C, 4BBL.D, 4BBL.E, 4BBL.F, 4BBL.G, 4BBL.H, 4BBL.I, 4BBL.J, 4BBL.K, 4BBL.L, 4BBL.M, 4BBL.N, 4BBL.O, 4BBL.P, 4BBL.Q, 4BBL.R, 4BBL.S, 4BBL.T, 4BBL.U, 4BBL.V, 4BBL.W, 4BBL.X explicitly.

These chains are represented by chain 4DYN.A which is 100% sequence identical.

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View how chain 4BBL.X compares with the representative chain PDP:4DYNAa. Select a comparison method:

Entity #2 | Chains Y,Z

Description: RNA rna | Length: 308

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.