Structural Similarities for the Entities in PDB 4ASS

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Feb-09-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I

Description: TUBR FROM BACILLUS THURINGIENSIS PBTOXIS protein | Length: 104

No structure alignment results are available for 4ASS.A, 4ASS.B, 4ASS.C, 4ASS.D, 4ASS.E, 4ASS.F, 4ASS.G, 4ASS.H, 4ASS.I explicitly.

These chains are represented by chain 4ASO.A which is 100% sequence identical.

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View how chain 4ASS.I compares with the representative chain PDP:4ASOAa. Select a comparison method:


Entity #2 | Chains Y

Description: TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 26 BP dna | Length: 26

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #3 | Chains Z

Description: TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 26 BP dna | Length: 26

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


References