Structural Similarities for the Entities in PDB 4AAQ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-17-2015

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I,J,K,L,M,N

Description: 60 KDA CHAPERONIN protein | Length: 548

No structure alignment results are available for 4AAQ.A, 4AAQ.B, 4AAQ.C, 4AAQ.D, 4AAQ.E, 4AAQ.F, 4AAQ.G, 4AAQ.H, 4AAQ.I, 4AAQ.J, 4AAQ.K, 4AAQ.L, 4AAQ.M, 4AAQ.N explicitly.

These chains are represented by chain 1KP8.A which has more than 95% sequence identity.

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View how chain 4AAQ.N compares with the representative chain d1kp8a1. Select a comparison method: