Structural Similarities for the Entities in PDB 3ZKJ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: May-10-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,D

Description: ANKYRIN REPEAT AND SOCS BOX PROTEIN 9 protein | Length: 261

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Entity #2 | Chains B,E

Description: TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein | Length: 96

No structure alignment results are available for 3ZKJ.B, 3ZKJ.E explicitly.

These chains are represented by chain 4AJY.C which is 100% sequence identical.

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View how chain 3ZKJ.E compares with the representative chain PDP:4AJYCa. Select a comparison method:


Entity #3 | Chains C,F

Description: TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein | Length: 118

No structure alignment results are available for 3ZKJ.C, 3ZKJ.F explicitly.

These chains are represented by chain 4AJY.B which is 100% sequence identical.

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View how chain 3ZKJ.F compares with the representative chain PDP:4AJYBa. Select a comparison method:


References