Structural Similarities for the Entities in PDB 3W4U

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Feb-02-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E

Description: Hemoglobin subunit zeta protein | Length: 142

No structure alignment results are available for 3W4U.A, 3W4U.C, 3W4U.E explicitly.

These chains are represented by chain 2W72.A which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 3W4U.E compares with the representative chain PDP:2W72Aa. Select a comparison method:


Entity #2 | Chains B,D,F

Description: Hemoglobin subunit beta protein | Length: 146

No structure alignment results are available for 3W4U.B, 3W4U.D, 3W4U.F explicitly.

These chains are represented by chain 2W72.A which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 3W4U.F compares with the representative chain PDP:2W72Aa. Select a comparison method:


References