Structural Similarities for the Entities in PDB 3W12

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains E

Description: Insulin receptor domains L1-CR protein | Length: 310

No structure alignment results are available for 3W12.E explicitly.

It is represented by chain 4XSS.E which is 100% sequence identical.

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Entity #2 | Chains C

Description: monoclonal antibody fab 83-7 fragment - heavy chain protein | Length: 116

No structure alignment results are available for 3W12.C explicitly.

It is represented by chain 4UNU.A which has more than 40% sequence identity.

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Entity #3 | Chains D

Description: monoclonal antibody fab 83-7 fragment - light chain protein | Length: 114

No structure alignment results are available for 3W12.D explicitly.

It is represented by chain 4UNU.A which has more than 50% sequence identity.

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Entity #4 | Chains A

Description: Insulin A chain protein | Length: 21

No structure alignment results are available for 3W12.A explicitly.

It is represented by chain 3W7Y.A which is 100% sequence identical.

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Entity #5 | Chains B

Description: Insulin B chain protein | Length: 26

No structure alignment results are available for 3W12.B explicitly.

It is represented by chain 3W7Y.B which is 100% sequence identical.

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Entity #6 | Chains F

Description: Insulin receptor alpha-CT peptide protein | Length: 16

This entity is too short to be considered for the all vs. all structure alignments.


References