Structural Similarities for the Entities in PDB 3V7A

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jul-19-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains E,F

Description: 5B18 heavy chain protein | Length: 223

No structure alignment results are available for 3V7A.E, 3V7A.F explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 3V7A.F compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains G,H

Description: 5B18 kappa chain protein | Length: 215

No structure alignment results are available for 3V7A.G, 3V7A.H explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 3V7A.H compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #3 | Chains A,B

Description: Capsid protein | Length: 315

No structure alignment results are available for 3V7A.A, 3V7A.B explicitly.

These chains are represented by chain 4OOX.A which has more than 50% sequence identity.

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View how chain 3V7A.B compares with the representative chain PDP:4OOXAa. Select a comparison method:


References