Structural Similarities for the Entities in PDB 3V6Z

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C

Description: Fab e6 Heavy Chain protein | Length: 224

No structure alignment results are available for 3V6Z.A, 3V6Z.C explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 3V6Z.C compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains B,D

Description: Fab e6 Light Chain protein | Length: 219

No structure alignment results are available for 3V6Z.B, 3V6Z.D explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 3V6Z.D compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #3 | Chains E,F

Description: e-antigen protein | Length: 159

No structure alignment results are available for 3V6Z.E, 3V6Z.F explicitly.

These chains are represented by chain 5GMZ.A which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 3V6Z.F compares with the representative chain PDP:5GMZAa. Select a comparison method:


References