Crystal structure of unliganded HIV-1 clade B strain YU2 gp120 core
PDB File (Text)
PDB File (gz)
mmCIF File (gz)
PDBML/XML File (gz)
Structure Factor (Text)
Structure Factor (gz)
Biological Assembly 1 (gz) (A)
Biological Assembly 2 (gz) (A)
Biological Assembly 3 (gz) (A)
Biological Assembly 4 (gz) (A)
Biological Assembly 5 (gz) (S)
Biological Assembly 6 (gz) (S)
Structural Similarities for the Entities in PDB 3TGQ
The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2]. To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment  is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser .
Entity #1: Chains: A,B,C,D
No structure alignment results are available for 3TGQ.A, 3TGQ.B, 3TGQ.C, 3TGQ.D explicitly.
These chains are represented by chain 4JZZ.A which is 100% sequence identical.
Calculate pairwise sequence or structure alignments.
A detailed description of the procedure for the all vs. all alignments is available.