Structural Similarities for the Entities in PDB 3TCL

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-20-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,H

Description: CH04 Heavy Chain Fab protein | Length: 237

No structure alignment results are available for 3TCL.A, 3TCL.H explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 3TCL.H compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains B,L

Description: CH04 Light Chain Fab protein | Length: 215

No structure alignment results are available for 3TCL.B, 3TCL.L explicitly.

These chains are represented by chain 4NZU.L which has more than 90% sequence identity.

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View how chain 3TCL.L compares with the representative chain PDP:4NZULa. Select a comparison method:


References