Structural Similarities for the Entities in PDB 3LRS

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-21-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E,H

Description: PG-16 Heavy Chain Fab protein | Length: 238

No structure alignment results are available for 3LRS.A, 3LRS.C, 3LRS.E, 3LRS.H explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

Show structure comparison results

  Loading...

View how chain 3LRS.H compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains B,D,F,L

Description: PG-16 Light Chain Fab protein | Length: 211

No structure alignment results are available for 3LRS.B, 3LRS.D, 3LRS.F, 3LRS.L explicitly.

These chains are represented by chain 4NZU.L which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 3LRS.L compares with the representative chain PDP:4NZULa. Select a comparison method:


References