Structural Similarities for the Entities in PDB 3IWM

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,C,D

Description: 3C-like proteinase protein | Length: 306

No structure alignment results are available for 3IWM.A, 3IWM.B, 3IWM.C, 3IWM.D explicitly.

These chains are represented by chain XXXX.null which has more than 95% sequence identity.

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View how chain 3IWM.D compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains E,F,G,H

Description: N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE protein | Length: 6

This entity is too short to be considered for the all vs. all structure alignments.


References