Structural Similarities for the Entities in PDB 3FXI

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: May-24-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: Toll-like receptor 4 protein | Length: 605

No structure alignment results are available for 3FXI.A, 3FXI.B explicitly.

These chains are represented by chain 2Z63.A which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 3FXI.B compares with the representative chain PDP:2Z63Aa. Select a comparison method:


Entity #2 | Chains C,D

Description: Lymphocyte antigen 96 protein | Length: 142

No structure alignment results are available for 3FXI.C, 3FXI.D explicitly.

These chains are represented by chain 2E56.A which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 3FXI.D compares with the representative chain PDP:2E56Aa. Select a comparison method:


References