The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].
To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment  is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser .
Currently viewing only significant results (P-value < 0.001). Show all available results.
Cluster data are up-to-date as of: Feb-02-2016
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A detailed description of the procedure for the all vs. all alignments is available.
Description: COMPLEMENT FACTOR H protein |
These chains are
represented by chain 2YBY.A
which has more than 50% sequence identity.
View how chain 2W80.G compares with the representative chain PDP:2YBYAa. Select a comparison method:
Description: FACTOR H BINDING PROTEIN protein |
These chains are
represented by chain 4Z3T.A
which has more than 70% sequence identity.
View how chain 2W80.H compares with the representative chain PDP:4Z3TAa. Select a comparison method:
The RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics:
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The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.