Structural Similarities for the Entities in PDB 2M4J

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: May-24-2016

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I

Description: Amyloid beta A4 protein protein | Length: 40

No structure alignment results are available for 2M4J.A, 2M4J.B, 2M4J.C, 2M4J.D, 2M4J.E, 2M4J.F, 2M4J.G, 2M4J.H, 2M4J.I explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

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View how chain 2M4J.I compares with the representative chain xxxx. Select a comparison method: