Structural Similarities for the Entities in PDB 2E9R

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: 5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3' rna | Length: 9

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #2 | Chains B

Description: 5'-R(*CP*CP*C*GP*GP*GP*CP*CP*C)-3' rna | Length: 6

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #3 | Chains X

Description: RNA-dependent RNA polymerase protein | Length: 476

No structure alignment results are available for 2E9R.X explicitly.

It is represented by chain 4WYW.A which has more than 95% sequence identity.

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View how chain 2E9R.X compares with the representative chain PDP:4WYWAa. Select a comparison method:


References