Structural Similarities for the Entities in PDB 2CHA

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Aug-23-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,E

Description: ALPHA-CHYMOTRYPSIN A protein | Length: 13

This entity is too short to be considered for the all vs. all structure alignments.


Entity #2 | Chains B,F

Description: ALPHA-CHYMOTRYPSIN A protein | Length: 131

No structure alignment results are available for 2CHA.B, 2CHA.F explicitly.

These chains are represented by chain 1YPH.C which is 100% sequence identical.

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View how chain 2CHA.F compares with the representative chain PDP:1YPHCa. Select a comparison method:


Entity #3 | Chains C,G

Description: ALPHA-CHYMOTRYPSIN A protein | Length: 97

No structure alignment results are available for 2CHA.C, 2CHA.G explicitly.

These chains are represented by chain 1YPH.E which is 100% sequence identical.

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View how chain 2CHA.G compares with the representative chain PDP:1YPHEa. Select a comparison method:


References