Structural Similarities for the Entities in PDB 2BYP

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-17-2015

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E

Description: SOLUBLE ACETYLCHOLINE RECEPTOR protein | Length: 214

No structure alignment results are available for 2BYP.A, 2BYP.B, 2BYP.C, 2BYP.D, 2BYP.E explicitly.

These chains are represented by chain 2WN9.A which is 100% sequence identical.

Show structure comparison results


View how chain 2BYP.E compares with the representative chain PDP:2WN9Aa. Select a comparison method:

Entity #2 | Chains F,G,H,I,J

Description: ALPHA-CONOTOXIN IMI protein | Length: 12

This entity is too short to be considered for the all vs. all structure alignments.