Structural Similarities for the Entities in PDB 2BCJ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: May-10-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: G-protein coupled receptor kinase 2 protein | Length: 689

No structure alignment results are available for 2BCJ.A explicitly.

It is represented by chain 3V5W.A which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 2BCJ.A compares with the representative chain PDP:3V5WAa. Select a comparison method:


Entity #2 | Chains B

Description: Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1 protein | Length: 340

No structure alignment results are available for 2BCJ.B explicitly.

It is represented by chain 2PBI.B which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 2BCJ.B compares with the representative chain PDP:2PBIBa. Select a comparison method:


Entity #3 | Chains G

Description: Guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2 subunit protein | Length: 71

No structure alignment results are available for 2BCJ.G explicitly.

It is represented by chain 3V5W.G which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 2BCJ.G compares with the representative chain PDP:3V5WG_. Select a comparison method:


Entity #4 | Chains Q

Description: G alpha I1, Guanine nucleotide-binding protein G(q), alpha subunit protein | Length: 353

No structure alignment results are available for 2BCJ.Q explicitly.

It is represented by chain 4N0D.A which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 2BCJ.Q compares with the representative chain PDP:4N0DAa. Select a comparison method:


References