Structural Similarities for the Entities in PDB 2A6H

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,K,L

Description: DNA-directed RNA polymerase alpha chain protein | Length: 315


Entity #2 | Chains C,M

Description: DNA-directed RNA polymerase beta chain protein | Length: 1119


Entity #3 | Chains D,N

Description: DNA-directed RNA polymerase beta' chain protein | Length: 1524


Entity #4 | Chains E,O

Description: RNA polymerase omega chain protein | Length: 99


Entity #5 | Chains F,P

Description: RNA polymerase sigma factor rpoD protein | Length: 423