Structural Similarities for the Entities in PDB 1XI4

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Aug-23-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I

Description: Clathrin heavy chain protein | Length: 1630

No structure alignment results are available for 1XI4.A, 1XI4.B, 1XI4.C, 1XI4.D, 1XI4.E, 1XI4.F, 1XI4.G, 1XI4.H, 1XI4.I explicitly.

These chains are represented by chain 3IYV.A which is 100% sequence identical.

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View how chain 1XI4.I compares with the representative chain PDP:3IYVAa. Select a comparison method:


Entity #2 | Chains J,K,L,M,N,O,P,Q,R

Description: Clathrin light chain A protein | Length: 70

No structure alignment results are available for 1XI4.J, 1XI4.K, 1XI4.L, 1XI4.M, 1XI4.N, 1XI4.O, 1XI4.P, 1XI4.Q, 1XI4.R explicitly.

These chains are represented by chain 3IYV.J which is 100% sequence identical.

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View how chain 1XI4.R compares with the representative chain PDP:3IYVJa. Select a comparison method:


References