Structural Similarities for the Entities in PDB 1VCB

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Aug-23-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,D,G,J

Description: PROTEIN (ELONGIN B) protein | Length: 118

No structure alignment results are available for 1VCB.A, 1VCB.D, 1VCB.G, 1VCB.J explicitly.

These chains are represented by chain 4AJY.B which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1VCB.J compares with the representative chain PDP:4AJYBa. Select a comparison method:


Entity #2 | Chains B,E,H,K

Description: PROTEIN (ELONGIN C) protein | Length: 112

  Loading...

Entity #3 | Chains C,F,I,L

Description: PROTEIN (VHL) protein | Length: 160

No structure alignment results are available for 1VCB.C, 1VCB.F, 1VCB.I, 1VCB.L explicitly.

These chains are represented by chain 4AJY.V which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1VCB.L compares with the representative chain PDP:4AJYVa. Select a comparison method:


References