Structural Similarities for the Entities in PDB 1UJJ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: ADP-ribosylation factor binding protein GGA1 protein | Length: 147

No structure alignment results are available for 1UJJ.A, 1UJJ.B explicitly.

These chains are represented by chain 3G2S.A which is 100% sequence identical.

Show structure comparison results


View how chain 1UJJ.B compares with the representative chain PDP:3G2SAa. Select a comparison method:

Entity #2 | Chains C

Description: C-terminal peptide from Beta-secretase protein | Length: 12

This entity is too short to be considered for the all vs. all structure alignments.