Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(2PR)G); A Human Telomeric Repeat Containing 2-aminopurine

Structural Similarities for the Entities in PDB 1U1R

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains B

Description: 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*(2PR)P*G)-3' dna | Length: 11

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.

Entity #2 | Chains A

Description: Heterogeneous nuclear ribonucleoprotein A1 protein | Length: 196

No structure alignment results are available for 1U1R.A explicitly.

It is represented by chain 1L3K.a which is 100% sequence identical.

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View how chain 1U1R.A compares with the representative chain d1l3ka1. Select a comparison method: