Structural Similarities for the Entities in PDB 1PXV

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: cysteine protease protein | Length: 183

No structure alignment results are available for 1PXV.A, 1PXV.B explicitly.

These chains are represented by chain 1CV8.a which has more than 40% sequence identity.

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View how chain 1PXV.B compares with the representative chain d1cv8a_. Select a comparison method:


Entity #2 | Chains C,D

Description: cysteine protease Inhibitor protein | Length: 111

No structure alignment results are available for 1PXV.C, 1PXV.D explicitly.

These chains are represented by chain 1NYC.a which is 100% sequence identical.

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View how chain 1PXV.D compares with the representative chain d1nyca_. Select a comparison method:


References