Structural Similarities for the Entities in PDB 1P58

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C

Description: Major envelope protein E protein | Length: 495

No structure alignment results are available for 1P58.A, 1P58.B, 1P58.C explicitly.

These chains are represented by chain 5WSN.A which has more than 50% sequence identity.

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View how chain 1P58.C compares with the representative chain PDP:5WSNAa. Select a comparison method:


Entity #2 | Chains D,E,F

Description: Envelope protein M protein | Length: 75

No structure alignment results are available for 1P58.D, 1P58.E, 1P58.F explicitly.

These chains are represented by chain 5WSN.B which has more than 40% sequence identity.

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View how chain 1P58.F compares with the representative chain PDP:5WSNBa. Select a comparison method:


References