Structural Similarities for the Entities in PDB 1OX9

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Oct-25-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H

Description: Stringent starvation protein B protein | Length: 108

No structure alignment results are available for 1OX9.A, 1OX9.B, 1OX9.C, 1OX9.D, 1OX9.E, 1OX9.F, 1OX9.G, 1OX9.H explicitly.

These chains are represented by chain 1OU8.a which has more than 50% sequence identity.

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View how chain 1OX9.H compares with the representative chain d1ou8a_. Select a comparison method:

Entity #2 | Chains I,J,K,L,M,N,O,P

Description: ssrA protein | Length: 8

This entity is too short to be considered for the all vs. all structure alignments.