Structural Similarities for the Entities in PDB 1OQO

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: immunoglobulin gamma-1 heavy chain constant region protein | Length: 212

No structure alignment results are available for 1OQO.A, 1OQO.B explicitly.

These chains are represented by chain 1L6X.a which is 100% sequence identical.

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View how chain 1OQO.B compares with the representative chain d1l6xa1. Select a comparison method:


Entity #2 | Chains C,D

Description: Minimized version of Protein A (Z34C) protein | Length: 34

No structure alignment results are available for 1OQO.C, 1OQO.D explicitly.

These chains are represented by chain 1L6X.b which is 100% sequence identical.

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View how chain 1OQO.D compares with the representative chain d1l6xb_. Select a comparison method:


References