Structural Similarities for the Entities in PDB 1OQE

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Oct-25-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I,J

Description: Tumor necrosis factor ligand superfamily member 13B, soluble form protein | Length: 144

No structure alignment results are available for 1OQE.A, 1OQE.B, 1OQE.C, 1OQE.D, 1OQE.E, 1OQE.F, 1OQE.G, 1OQE.H, 1OQE.I, 1OQE.J explicitly.

These chains are represented by chain 1KXG.a which is 100% sequence identical.

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View how chain 1OQE.J compares with the representative chain d1kxga_. Select a comparison method:

Entity #2 | Chains K,L,M,N,O,P,Q,R

Description: Tumor necrosis factor receptor superfamily member 13C protein | Length: 31