Structural Similarities for the Entities in PDB 1OJD

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Oct-18-2016

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I,L

Description: AMINE OXIDASE [FLAVIN-CONTAINING] B protein | Length: 520

No structure alignment results are available for 1OJD.A, 1OJD.B, 1OJD.C, 1OJD.D, 1OJD.E, 1OJD.F, 1OJD.G, 1OJD.H, 1OJD.I, 1OJD.L explicitly.

These chains are represented by chain 2XFN.A which is 100% sequence identical.

Show structure comparison results


View how chain 1OJD.L compares with the representative chain PDP:2XFNAa. Select a comparison method: