Structural Similarities for the Entities in PDB 1OFI

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C

Description: ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein | Length: 310

No structure alignment results are available for 1OFI.A, 1OFI.B, 1OFI.C explicitly.

These chains are represented by chain 1OFH.a which is 100% sequence identical.

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View how chain 1OFI.C compares with the representative chain d1ofha_. Select a comparison method:


Entity #2 | Chains G,H,I,L,M,N

Description: ATP-DEPENDENT PROTEASE HSLV protein | Length: 174

No structure alignment results are available for 1OFI.G, 1OFI.H, 1OFI.I, 1OFI.L, 1OFI.M, 1OFI.N explicitly.

These chains are represented by chain 1G3K.a which is 100% sequence identical.

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View how chain 1OFI.N compares with the representative chain d1g3ka_. Select a comparison method:


References