Structural Similarities for the Entities in PDB 1OAZ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-13-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: THIOREDOXIN 1 protein | Length: 123

No structure alignment results are available for 1OAZ.A, 1OAZ.B explicitly.

These chains are represented by chain 4OO4.A which has more than 50% sequence identity.

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View how chain 1OAZ.B compares with the representative chain PDP:4OO4Aa. Select a comparison method:


Entity #2 | Chains H,J

Description: IMMUNOGLOBULIN E protein | Length: 122

No structure alignment results are available for 1OAZ.H, 1OAZ.J explicitly.

These chains are represented by chain 4UNU.A which has more than 40% sequence identity.

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Entity #3 | Chains L,N

Description: IMMUNOGLOBULIN E protein | Length: 110

No structure alignment results are available for 1OAZ.L, 1OAZ.N explicitly.

These chains are represented by chain 4UNU.A which has more than 50% sequence identity.

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View how chain 1OAZ.N compares with the representative chain PDP:4UNUAa. Select a comparison method:


References