Structural Similarities for the Entities in PDB 1O94

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: TRIMETHYLAMINE DEHYDROGENASE protein | Length: 729

  Loading...

Entity #2 | Chains C,E

Description: ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT protein | Length: 264

No structure alignment results are available for 1O94.C, 1O94.E explicitly.

These chains are represented by chain 3CLS.c which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1O94.E compares with the representative chain d3clsc1. Select a comparison method:


Entity #3 | Chains D,F

Description: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT protein | Length: 320

No structure alignment results are available for 1O94.D, 1O94.F explicitly.

These chains are represented by chain 3CLS.d which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 1O94.F compares with the representative chain d3clsd1. Select a comparison method:


References