Structural Similarities for the Entities in PDB 1NRL

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: Orphan nuclear receptor PXR protein | Length: 316

No structure alignment results are available for 1NRL.A, 1NRL.B explicitly.

These chains are represented by chain 4X1F.A which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1NRL.B compares with the representative chain PDP:4X1FAa. Select a comparison method:


Entity #2 | Chains C,D

Description: Nuclear Receptor Coactivator 1 isoform 3 protein | Length: 25

No structure alignment results are available for 1NRL.C, 1NRL.D explicitly.

These chains are represented by chain 5HJS.C which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1NRL.D compares with the representative chain PDP:5HJSC_. Select a comparison method:


References