Structural Similarities for the Entities in PDB 1NIW

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E,G

Description: calmodulin protein | Length: 148

No structure alignment results are available for 1NIW.A, 1NIW.C, 1NIW.E, 1NIW.G explicitly.

These chains are represented by chain 1EXR.a which has more than 90% sequence identity.

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View how chain 1NIW.G compares with the representative chain d1exra_. Select a comparison method:

Entity #2 | Chains B,D,F,H

Description: Nitric-oxide synthase, endothelial protein | Length: 20