Structural Similarities for the Entities in PDB 1N6D

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F

Description: tricorn protease protein | Length: 1071

No structure alignment results are available for 1N6D.A, 1N6D.B, 1N6D.C, 1N6D.D, 1N6D.E, 1N6D.F explicitly.

These chains are represented by chain 1K32.a which is 100% sequence identical.

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View how chain 1N6D.F compares with the representative chain d1k32a1. Select a comparison method:

Entity #2 | Chains G,H,I,J,K,L

Description: RVRK protein | Length: 4

This entity is too short to be considered for the all vs. all structure alignments.